cellranger 3.0.2 is located under /share/pkg/cellranger/3.0.2
/share/pkg/cellranger/3.0.2/cellranger-cs/3.0.2/bin
cellranger mkref (3.0.2)
Copyright (c) 2019 10x Genomics, Inc.  All rights reserved.
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Nov 15 13:55:03 ..... Started STAR run
Nov 15 13:55:03 ... Starting to generate Genome files
Nov 15 13:55:40 ... starting to sort  Suffix Array. This may take a long time...
Nov 15 13:55:44 ... sorting Suffix Array chunks and saving them to disk...
Nov 15 14:14:33 ... loading chunks from disk, packing SA...
Nov 15 14:14:55 ... Finished generating suffix array
Nov 15 14:14:55 ... Generating Suffix Array index
Nov 15 14:16:35 ... Completed Suffix Array index
Nov 15 14:16:35 ..... Processing annotations GTF
Nov 15 14:16:45 ..... Inserting junctions into the genome indices
Nov 15 14:22:52 ... writing Genome to disk ...
Nov 15 14:22:57 ... writing Suffix Array to disk ...
Nov 15 14:23:26 ... writing SAindex to disk
Nov 15 14:23:31 ..... Finished successfully
Creating new reference folder at /share/data/umw_biocore/genome_data/cellranger/zebrafish/GRCz11_v4.2.1/GRCz11_v4.2.1
...done

Writing genome FASTA file into reference folder...
...done

Computing hash of genome FASTA file...
...done

Indexing genome FASTA file...
...done

Writing genes GTF file into reference folder...
...done

Computing hash of genes GTF file...
...done

Writing genes index file into reference folder (may take over 10 minutes for a 3Gb genome)...
...done

Writing genome metadata JSON file into reference folder...
...done

Generating STAR genome index (may take over 8 core hours for a 3Gb genome)...
...done.

>>> Reference successfully created! <<<

You can now specify this reference on the command line:
cellranger --transcriptome=/share/data/umw_biocore/genome_data/cellranger/zebrafish/GRCz11_v4.2.1/GRCz11_v4.2.1 ...

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Sender: LSF System <lsfadmin@c40b04>
Subject: Job 64687: <module load cellranger/3.0.2 && cd /share/data/umw_biocore/genome_data/cellranger/zebrafish/GRCz11_v4.2.1 && cellranger mkref --genome=GRCz11_v4.2.1 --fasta=danRer11.primary.fa --genes=LL_V4.2.1.validated.gtf --ref-version=1.0.0> in cluster <umghpcc> Done

Job <module load cellranger/3.0.2 && cd /share/data/umw_biocore/genome_data/cellranger/zebrafish/GRCz11_v4.2.1 && cellranger mkref --genome=GRCz11_v4.2.1 --fasta=danRer11.primary.fa --genes=LL_V4.2.1.validated.gtf --ref-version=1.0.0> was submitted from host <ghpcc06> by user <gxy11w> in cluster <umghpcc> at Fri Nov 15 13:52:12 2019.
Job was executed on host(s) <c40b04>, in queue <long>, as user <gxy11w> in cluster <umghpcc> at Fri Nov 15 13:52:48 2019.
</home/gxy11w> was used as the home directory.
</share/data/umw_biocore/genome_data/cellranger/zebrafish/GRCz11_v4.2.1> was used as the working directory.
Started at Fri Nov 15 13:52:48 2019.
Terminated at Fri Nov 15 14:23:34 2019.
Results reported at Fri Nov 15 14:23:34 2019.

Your job looked like:

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# LSBATCH: User input
module load cellranger/3.0.2 && cd /share/data/umw_biocore/genome_data/cellranger/zebrafish/GRCz11_v4.2.1 && cellranger mkref --genome=GRCz11_v4.2.1 --fasta=danRer11.primary.fa --genes=LL_V4.2.1.validated.gtf --ref-version=1.0.0
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Successfully completed.

Resource usage summary:

    CPU time :                                   1778.77 sec.
    Max Memory :                                 19151 MB
    Average Memory :                             11130.49 MB
    Total Requested Memory :                     20048.00 MB
    Delta Memory :                               897.00 MB
    Max Swap :                                   -
    Max Processes :                              6
    Max Threads :                                15
    Run time :                                   1845 sec.
    Turnaround time :                            1882 sec.

The output (if any) is above this job summary.